KG Lab

This page summarizes the projects I worked on during my Junior Research Fellow tenure at Tata Institute of Fundamental Research, Hyderabad.

Note: Some of the links are private links and would require special access to view. Contact yatharth1997+git@gmail.com , if you have the permission to view the links but are unable to do so.

DIY Correlator Card

The source code for the Correlator card project can be found here: https://github.com/yatharthb97/Correlator .

Teensy 4.1 Libraries:

  1. PITController : Embedded C++ : Describes a class to control the Periodic Interrupt Timer (PIT) of a PJRC Teensy 4.1 microcontroller.
  2. PIT_LifetimeTimer : Embedded C++ : Class Interface for using the Life Time Timer functionality of the Periodic Interrupt Timer (PIT) on Teensy 4.1 microcontroller.
  3. Quadtimer lib for Gate Counting. TODO

Other Software Projects

  1. Brownian dynamics simulation of free dye in an FCS setup: [langsim] https://github.com/yatharthb97/langsim .
  2. Lattice simulation of FCS - simulation on microcontroller: [NOISE] https://github.com/yatharthb97/NOISE .
  3. Serial port interface objects for controlling multiple ports: [comms] https://github.com/yatharthb97/comms .

Fluorometer Code

Resources that were built for the in-house fluorometer.

  1. Linear Stage Fluorometer [Arduino]: https://github.com/yatharthb97/LinearStageFluorometer .
  2. Fluorometer Control Layer [PC side - python]: https://github.com/yatharthb97/FluorometerControlLayer .
  3. Syringe Dispenser Control Layer [Arduino and compiler on python]: https://github.com/yatharthb97/SyringeStage3D
  4. Fluorometer PCB files: TODO
  5. Generic old code / tests / single file sketches [Arduino and C++]: https://github.com/yatharthb97/Fluorometry .

fcstools

python module for filtering and analysis, and plotting of Fluorescence Correlation Spectroscopy (FCS) and Fluorescence Count Rate measurements.

Repository link [python3]: https://github.com/yatharthb97/fcstools .

Analysis Scripts

Analysis scripts for performed experiments is hosted at[ipython]: https://github.com/yatharthb97/KGLabAnalysis .

Miscellaneous Code [not maintained]

Repository link: https://github.com/yatharthb97/KGLabMiscCode .